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Backbone assignment of perdeuterated proteins using long-range H/C-dipolar transfers
Authors:Rasmus Linser
Affiliation:(1) Analytical Centre, University of New South Wales, Sydney, NSW, 2052, Australia;(2) School of Chemistry, University of New South Wales, Sydney, NSW, 2052, Australia;(3) Present address: Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, 240 Longwood Av., Boston, MA 02115, USA
Abstract:For micro-crystalline proteins, solid-state nuclear magnetic resonance spectroscopy of perdeuterated samples can provide spectra of unprecedented quality. Apart from allowing to detect sparsely introduced protons and thereby increasing the effective resolution for a series of sophisticated techniques, deuteration can provide extraordinary coherence lifetimes—obtainable for all involved nuclei virtually without decoupling and enabling the use of scalar magnetization transfers. Unfortunately, for fibrillar or membrane-embedded proteins, significantly shorter transverse relaxation times have been encountered as compared to micro-crystalline proteins despite an identical sample preparation, calling for alternative strategies for resonance assignment. In this work we propose an approach towards sequential assignment of perdeuterated proteins based on long-range 1H/13C Cross Polarization transfers. This strategy gives rise to H/N-separated correlations involving Cα, Cβ, and CO chemical shifts of both, intra- and interresidual contacts, and thus connecting adjacent residues independent of transverse relaxation times.
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