On A Six-Dimensional Representation of RNA Secondary Structures |
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| Authors: | Bo Liao Kequan Ding Tian-ming Wang |
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| Affiliation: | 1. Science 100 Graduate School of the Chinese Academy of Sciences , Beijing , 100039 , China;2. Department of Applied Mathematics , Dalian University of Technology , Dalian , 116024 , China |
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| Abstract: | Abstract In this paper, we proposed a 6-D representation of RNA secondary structures. The use of the 6-D representation is illustrated by constructing structure invariants. Comparisons with the similarity/dissimilarity results based on 6-D representation for a set of RNA secondary structures, are considered to illustrate the use of our structure invariants based on the entries in derived sequence matrices restricted to a selected width of a band along the main diagonal. |
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| Keywords: | RNA secondary structure Similarity Virus 6-D graphical representation |
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