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Restriction map of Chinese hamster mitochondrial DNA containing replication coordinates: comparison with Syrian hamster mitochondrial genome
Authors:Margit MK Nass
Institution:Department of Radiation Therapy University of Pennsylvania School of Medicine Medical Laboratories/G3 Philadelphia, PA 19104 U.S.A. Tel. (215)898-5768
Abstract:A precise physical map, containing the structurally and operationally defined D-loop origin, terminal region, and direction of heavy-strand replication, has been constructed for mitochondrial DNA (mtDNA) from ovary (CHO-KI) and lung cells of Chinese hamster (Cricetulus griseus 2 N = 22), and compared with our previously established genome coordinates for mtDNA from Syrian hamster ( Mesocricetus auratus 2 N = 44). All four HpaI sites in Cricetulus are conserved in Mesocricetus (8 sites). Extensive variation exists for hexanucleotides cleaved by EcoRI HindIII PstI. KpnI and BamHI. Sequence divergence between Chinese and Syrian hamster mtDNAs, as reflected from analysis of the mapped recognition sites for these six endonucleases, is estimated as 5–9% base substitutions. mtDNAs from both hamster and several other mammalian species contain a commonly conserved HpaI site in the region of light strand initiation.
Keywords:Physical maps  pulse-chase label analysis  gel electrophoresis  hybridization  sequence conservation and divergence  bp  base pairs  CHO  Chinese hamster ovary  kb  kilobase pairs  mtDNA  mitochondrial DNA  N  haploid number of chromosomes  heavy strand origin  light strand origin  p  base substitutions per nucleotide  rRNA  ribosomal RNA
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