The association between Interleukin (IL)-4 gene intron 3 VNTR polymorphism and alopecia areata (AA) in Turkish population |
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Authors: | Gö knur Kalkan,Nevin Karakus,Yalç ın Baş,Zennure Takç ı,Pınar Ö zuğuz,Ö mer Ateş,Serbulent Yigit |
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Affiliation: | 1. Gaziosmanpasa University, School of Medicine, Department of Dermatology, Tokat, Turkey;2. Gaziosmanpasa University, School of Medicine, Department of Medical Biology, Tokat, Turkey;3. Afyon Kocatepe University, School of Medicine, Department of Dermatology, Afyon, Turkey |
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Abstract: | ObjectiveAlopecia areata (AA) is hypothesized to be an organ-specific autoimmune disease of hair follicles mediated by T cells. As immunological and genetic factors have been implicated in the pathogenesis of AA, the purpose of the present study was to investigate possible associations between the functional Interleukin (IL)-4 gene intron 3 VNTR polymorphism and AA susceptibility and disease progression in Turkish population.MethodsThe study group consisted of 116 unrelated patients with AA and 125 unrelated healthy controls. Genomic DNA was isolated and IL-4 gene 70 bp VNTR polymorphism determined by using polymerase chain reaction (PCR) with specific primers.ResultsNo association was observed between AA patients and controls according to genotype distribution (p = 0.051). The allele distribution of IL-4 gene intron 3 VNTR polymorphism was statistically different between AA patients and control group (p = 0.026). The frequency of P1 allele in patients was significantly higher than that in the control group. When the P2P2 genotype was compared with P1P2 + P1P1 genotypes, a statistically significant difference was observed between patients and controls (p = 0.036). Intron 3 VNTR polymorphism in the IL-4 gene was found to be associated with AA susceptibility in Turkish population.ConclusionThe results suggest that IL-4 VNTR polymorphism in the intron 3 region may be a risk factor for the development of AA among Turkish population. This is the first to report that intron 3 VNTR polymorphism in the IL-4 gene is associated with AA susceptibility. |
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Keywords: | AA, Alopecia areata IL, interleukin PCR, polymerase chain reaction VNTR, variable number of tandem repeat Th cells, T helper cells TC cells, cytotoxic T cells NK, natural killer TNF, tumor necrosis factors alpha AT, alopecia totalis AU, alopecia universalis SD, standard deviation SPSS, Statistical Package for the Social Sciences ANOVA, analysis of variance OR, odds ratio CI, confidence interval HLA, human leukocyte antigen SNPs, single-nucleotide polymorphisms RA, rheumatoid arthritis ESRD, end-stage renal disease SLE, systemic lupus erythematosus MS, multiple sclerosis |
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