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The association between Interleukin (IL)-4 gene intron 3 VNTR polymorphism and alopecia areata (AA) in Turkish population
Authors:  knur Kalkan,Nevin Karakus,Yalç  ın Baş,Zennure Takç  ı,Pınar Ö  zuğuz,Ö  mer Ateş,Serbulent Yigit
Affiliation:1. Gaziosmanpasa University, School of Medicine, Department of Dermatology, Tokat, Turkey;2. Gaziosmanpasa University, School of Medicine, Department of Medical Biology, Tokat, Turkey;3. Afyon Kocatepe University, School of Medicine, Department of Dermatology, Afyon, Turkey
Abstract:

Objective

Alopecia areata (AA) is hypothesized to be an organ-specific autoimmune disease of hair follicles mediated by T cells. As immunological and genetic factors have been implicated in the pathogenesis of AA, the purpose of the present study was to investigate possible associations between the functional Interleukin (IL)-4 gene intron 3 VNTR polymorphism and AA susceptibility and disease progression in Turkish population.

Methods

The study group consisted of 116 unrelated patients with AA and 125 unrelated healthy controls. Genomic DNA was isolated and IL-4 gene 70 bp VNTR polymorphism determined by using polymerase chain reaction (PCR) with specific primers.

Results

No association was observed between AA patients and controls according to genotype distribution (p = 0.051). The allele distribution of IL-4 gene intron 3 VNTR polymorphism was statistically different between AA patients and control group (p = 0.026). The frequency of P1 allele in patients was significantly higher than that in the control group. When the P2P2 genotype was compared with P1P2 + P1P1 genotypes, a statistically significant difference was observed between patients and controls (p = 0.036). Intron 3 VNTR polymorphism in the IL-4 gene was found to be associated with AA susceptibility in Turkish population.

Conclusion

The results suggest that IL-4 VNTR polymorphism in the intron 3 region may be a risk factor for the development of AA among Turkish population. This is the first to report that intron 3 VNTR polymorphism in the IL-4 gene is associated with AA susceptibility.
Keywords:AA, Alopecia areata   IL, interleukin   PCR, polymerase chain reaction   VNTR, variable number of tandem repeat   Th cells, T helper cells   TC cells, cytotoxic T cells   NK, natural killer   TNF, tumor necrosis factors alpha   AT, alopecia totalis   AU, alopecia universalis   SD, standard deviation   SPSS, Statistical Package for the Social Sciences   ANOVA, analysis of variance   OR, odds ratio   CI, confidence interval   HLA, human leukocyte antigen   SNPs, single-nucleotide polymorphisms   RA, rheumatoid arthritis   ESRD, end-stage renal disease   SLE, systemic lupus erythematosus   MS, multiple sclerosis
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