首页 | 本学科首页   官方微博 | 高级检索  
     


Analysis of the inheritance pattern of a Chinese family with phaeochromocytomas through whole exome sequencing
Authors:Min Cao  Fukang Sun  Xin Huang  Jun Dai  Bin Cui  Guang Ning
Affiliation:1. Laboratory of Endocrinology and Metabolism, Institute of Health Sciences, Shanghai Institutes for Biological Sciences (SIBS), Chinese Academy of Sciences (CAS) & Shanghai Jiao Tong University School of Medicine (SJTUSM), 225 South ChongQing Road, Shanghai 200025, PR China;2. Shanghai Clinical Center for Endocrine and Metabolic Diseases, Department of Urology, Ruijin Hospital, Shanghai JiaoTong University School of Medicine, 197 RuiJin Er Lu, Shanghai 200025, PR China
Abstract:Phaeochromocytomas (PCCs) and paragangliomas (PGLs) are rare, catecholamine-producing tumors. Most familial PCC/PGLs have been detected to be autosomal dominantly inherited. However, this study was undertaken in a family with PCCs to determine candidate genes in a dominant or recessive inheritance pattern. After excluding mutations in ten PCC/PGL susceptibility genes by Sanger sequencing, we used whole exome sequencing for screening on the four family members to discover novel candidate genes associated with PCCs. Based on the inexistence of non-synonymous mutations or indels in the ten known genes and the structure of this pedigree, 3 damaging loci with dominant inheritance pattern, and 5 damaging loci with recessive homozygous inheritance pattern and 6 damaging genes with compound heterozygous inheritance pattern were narrowed down to indicate the association with PCCs. According to the Gene Ontology (GO) category analysis on the combined results, cell adhesion showed the most significant enrichment.
Keywords:CT, Computed Tomography   CTA, Computed Tomography Angiography   FDR, False Discovery Rate   GO, Gene Ontology   Indel, Insertion&ndash  Deletion   LOD, Logarithm of Odds   MEN2, Multiple Endocrine Neoplasia Type 2   MN, Metanephrine   NF1, Neurofibromatosis Type 1   NMN, Normetanephrine   NPL, Nonparametric Linkage   NS, Non-synonymous   PCCs, Phaeochromocytomas   PGLs, Paragangliomas   SNP, Single Nucleotide Polymorphism   SNV, Single Nucleotide Variation   SS, Splice Site   TR, Target Region   VHL, Von Hippel&ndash  Lindau
本文献已被 ScienceDirect 等数据库收录!
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号