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Metal ion and inter-domain interactions as functional networks in E. coli topoisomerase I
Authors:Claudia Sissi  Bokun Cheng  Valentina Lombardo  Yuk-Ching Tse-Dinh  Manlio Palumbo
Affiliation:1. Dept. of Pharmaceutical and Pharmacological Sciences, v. Marzolo 5, 35131 Padova, Italy;2. Dept. of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10595, USA
Abstract:Escherichia coli topoisomerase I (EcTopoI) is a type IA bacterial topoisomerase which is receiving large attention due to its potential application as novel target for antibacterial therapeutics. Nevertheless, a detailed knowledge of its mechanism of action at molecular level is to some extent lacking. This is partly due to the requirement of several factors (metal ions, nucleic acid) to the proper progress of the enzyme catalytic cycle. Additionally, each of them can differently affect the protein structure.
Keywords:EcTopoI, Escherichia coli topoisomerase I   Top67, 67   kDa N-terminal domain of Escherichia coli topoisomerase I   ZD, 30   kDa C-terminal portion of Escherichia coli topoisomerase I   CD, circular dichroism   Tm, melting temperature   BSA, bovine serum albumine   DTT, dithiothreitol   SDS, sodium dodecyl sulphate   Tris, tris(hydroxymethyl)aminomethane   EDTA, ethylenediaminetetraacetic acid
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