Metal ion and inter-domain interactions as functional networks in E. coli topoisomerase I |
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Authors: | Claudia Sissi Bokun Cheng Valentina Lombardo Yuk-Ching Tse-Dinh Manlio Palumbo |
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Affiliation: | 1. Dept. of Pharmaceutical and Pharmacological Sciences, v. Marzolo 5, 35131 Padova, Italy;2. Dept. of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10595, USA |
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Abstract: | Escherichia coli topoisomerase I (EcTopoI) is a type IA bacterial topoisomerase which is receiving large attention due to its potential application as novel target for antibacterial therapeutics. Nevertheless, a detailed knowledge of its mechanism of action at molecular level is to some extent lacking. This is partly due to the requirement of several factors (metal ions, nucleic acid) to the proper progress of the enzyme catalytic cycle. Additionally, each of them can differently affect the protein structure. |
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Keywords: | EcTopoI, Escherichia coli topoisomerase I Top67, 67 kDa N-terminal domain of Escherichia coli topoisomerase I ZD, 30 kDa C-terminal portion of Escherichia coli topoisomerase I CD, circular dichroism Tm, melting temperature BSA, bovine serum albumine DTT, dithiothreitol SDS, sodium dodecyl sulphate Tris, tris(hydroxymethyl)aminomethane EDTA, ethylenediaminetetraacetic acid |
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