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The interplay between structure and function in intrinsically unstructured proteins
Authors:Tompa Peter
Affiliation:Institute of Enzymology, Biological Research Center, Hungarian Academy of Sciences, P.O. Box 7, H-1518 Budapest, Hungary. tompa@enzim.hu
Abstract:Intrinsically unstructured proteins (IUPs) are common in various proteomes and occupy a unique structural and functional niche in which function is directly linked to structural disorder. The evidence that these proteins exist without a well-defined folded structure in vitro is compelling, and justifies considering them a separate class within the protein world. In this paper, novel advances in the rapidly advancing field of IUPs are reviewed, with the major attention directed to the evidence of their unfolded character in vivo, the interplay of their residual structure and their various functional modes and the functional benefits their malleable structural state provides. Via all these details, it is demonstrated that in only a couple of years after its conception, the idea of protein disorder has already come of age and transformed our basic concepts of protein structure and function.
Keywords:CBP, CREB-binding protein   CD, circular dichroism   CREB, cAMP response element binding protein   Cdk, cyclin-dependent kinase   CST, calpastatin   DHPR, dihydropyridine receptor   FTIR, Fourier-transformed infrared spectroscopy   IUP, intrinsically unstructured protein   KID, kinase-inducible domain   MAP2, microtubule-associated protein 2   MoRE, molecular recognition element   NACP, non-A beta component of Alzheimer’s disease amyloid plaque (also termed α-synuclein)   NMR, nuclear magnetic resonance   PCS, primary contact site   PEVK, region rich in Pro, Glu, Val and Lys   PP II, polyproline II helix   RNAP II, DNA-dependent RNA polymerase II   ROA, Raman optical activity   SDS-PAGE, sodium dodecyl sulfate-polyacrylamide gel electrophoresis
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