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Multi-enzyme logic network architectures for assessing injuries: digital processing of biomarkers
Authors:Halámek Jan  Bocharova Vera  Chinnapareddy Soujanya  Windmiller Joshua Ray  Strack Guinevere  Chuang Min-Chieh  Zhou Jian  Santhosh Padmanabhan  Ramirez Gabriela V  Arugula Mary A  Wang Joseph  Katz Evgeny
Affiliation:Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810, USA.
Abstract:A multi-enzyme biocatalytic cascade processing simultaneously five biomarkers characteristic of traumatic brain injury (TBI) and soft tissue injury (STI) was developed. The system operates as a digital biosensor based on concerted function of 8 Boolean AND logic gates, resulting in the decision about the physiological conditions based on the logic analysis of complex patterns of the biomarkers. The system represents the first example of a multi-step/multi-enzyme biosensor with the built-in logic for the analysis of complex combinations of biochemical inputs. The approach is based on recent advances in enzyme-based biocomputing systems and the present paper demonstrates the potential applicability of biocomputing for developing novel digital biosensor networks.
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