Species Delimitation--a Geneious plugin for the exploration of species boundaries |
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Authors: | Masters Bradley C Fan Vicky Ross Howard A |
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Affiliation: | Bioinformatics Institute, University of Auckland, Private Bag 92019, Auckland Mail Centre, Auckland 1142, New Zealand. |
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Abstract: | Species Delimitation is a plugin to the Geneious software to support the exploration of species boundaries in a gene tree. The user assigns taxa to putative species and the plugin computes statistics relating to the probability of the observed monophyly or exclusivity having occurred by chance in a coalescent process. It also assesses the within and between species genetic distances to infer the probability with which members of a putative species might be identified successfully with tree-based methods. |
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Keywords: | coalescence geneious phylogenetic trees species delimitation |
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