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Odorant receptors in cancer
Authors:Chan Chung  Hee Jin Cho  ChaeEun Lee  JaeHyung Koo
Affiliation:1.Department of New Biology, DGIST, Daegu 42988, Korea;2.New Biology Research Center (NBRC), DGIST, Daegu 42988, Korea;3.Department of Biomedical Convergence Science and Technology, Kyungpook National University, Daegu 41566, Korea;4.Cell and Matrix Research Institute, Kyungpook National University, Daegu 41944, Korea;5.Korea Brain Research Institute (KBRI), Daegu 41062, Korea
Abstract:Odorant receptors (ORs), the largest subfamily of G protein-coupled receptors, detect odorants in the nose. In addition, ORs were recently shown to be expressed in many nonolfactory tissues and cells, indicating that these receptors have physiological and pathophysiological roles beyond olfaction. Many ORs are expressed by tumor cells and tissues, suggesting that they may be associated with cancer progression or may be cancer biomarkers. This review describes OR expression in various types of cancer and the association of these receptors with various types of signaling mechanisms. In addition, the clinical relevance and significance of the levels of OR expression were evaluated. Namely, levels of OR expression in cancer were analyzed based on RNA-sequencing data reported in the Cancer Genome Atlas; OR expression patterns were visualized using t-distributed stochastic neighbor embedding (t-SNE); and the associations between patient survival and levels of OR expression were analyzed. These analyses of the relationships between patient survival and expression patterns obtained from an open mRNA database in cancer patients indicate that ORs may be cancer biomarkers and therapeutic targets.
Keywords:Cancer   Ectopic expression   Odorant receptor (OR)   TCGA   t-SNE
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