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Structural analysis of mucoidan, an acidic extracellular polysaccharide produced by a pristane-assimilating marine bacterium, Rhodococcus erythropolis PR4
Authors:Urai Makoto  Yoshizaki Hiroshi  Anzai Hirosi  Ogihara Jun  Iwabuchi Noriyuki  Harayama Shigeaki  Sunairi Michio  Nakajima Mutsuyasu
Affiliation:Laboratory of Molecular Microbiology, Department of Applied Biological Science, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa 252-8510, Japan.
Abstract:Rhodococcus erythropolis PR4 is a marine bacterium that can degrade various alkanes including pristane, a C(19) branched alkane. This strain produces a large quantity of extracellular polysaccharides (EPS), which are assumed to play an important role in the hydrocarbon tolerance of R. erythropolis PR4. The strain produced an acidic EPS, mucoidan, together with a fatty acid-containing EPS, PR4 FACEPS. The chemical structure of the mucoidan was determined using (1)H and (13)C NMR spectroscopy and by conducting 2D DQF-COSY, TOCSY, HMQC, HMBC, and NOESY experiments. The mucoidan was shown to consist of a pentasaccharide repeating unit with the following structure: [structure: see text].
Keywords:EPS, extracellular polysaccharide   FACEPS, fatty acid-containing extracellular polysaccharides   CTAB, cetyltrimethylammomium bromide   TFA, trifluoroacetic acid   ABEE, 4-aminobenzoic acid ethyl ester   DQF-COSY, double quantum filtered-correlation spectroscopy   TOCSY, total correlation spectroscopy   HMQC, heteronuclear multiple-quantum coherence   HMBC, heteronuclear multiple-bond coherence   NOESY, nuclear Overhauser effect spectroscopy
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