Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses |
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| Authors: | Usadel Björn Nagel Axel Thimm Oliver Redestig Henning Blaesing Oliver E Palacios-Rojas Natalia Selbig Joachim Hannemann Jan Piques Maria Conceição Steinhauser Dirk Scheible Wolf-Rüdiger Gibon Yves Morcuende Rosa Weicht Daniel Meyer Svenja Stitt Mark |
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| Affiliation: | Björn Usadel, Axel Nagel, Oliver Thimm, Henning Redestig, Oliver E. Blaesing, Natalia Palacios-Rojas, Joachim Selbig, Jan Hannemann, Maria Conceição Piques, Dirk Steinhauser, Wolf-Rüdiger Scheible, Yves Gibon, Rosa Morcuende, Daniel Weicht, Svenja Meyer, and Mark Stitt |
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| Abstract: | MapMan is a user-driven tool that displays large genomics datasets onto diagrams of metabolic pathways or other processes. Here, we present new developments, including improvements of the gene assignments and the user interface, a strategy to visualize multilayered datasets, the incorporation of statistics packages, and extensions of the software to incorporate more biological information including visualization of coresponding genes and horizontal searches for similar global responses across large numbers of arrays. |
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