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Preliminary Study on Linkage Mapping Based on Microsatellite DNA and AFLP Markers Using Homozygous Clonal Fish in Ayu (Plecoglossus altivelis)
Authors:Tomohisa?Watanabe,Hironobu?Fujita,Kimio?Yamasaki,Shingo?Seki,Nobuhiko?Taniguchi  author-information"  >  author-information__contact u-icon-before"  >  mailto:nobuhiko@bios.tohoku.ac.jp"   title="  nobuhiko@bios.tohoku.ac.jp"   itemprop="  email"   data-track="  click"   data-track-action="  Email author"   data-track-label="  "  >Email author
Affiliation:(1) Laboratory of Applied Population Genetics, Graduate School of Agricultural Science, Tohoku University, 1-1 Tsutsumidori-amamiyamachi, Sendai, Miyagi 981-8555, Japan;(2) Department of Aquaculture, Faculty of Agriculture, Kochi University, B-200, Monobe, Nankoku, Kochi 783-8502, Japan;(3) Wakayama Prefectural Freshwater Fisheries Center, Chikazuki 32-3, Momoyama, Wakayama 649-6112, Japan
Abstract:A mapping referential family (F1) of ayu was produced by crossing a normal diploid male with a homozygous clonal female. A genetic linkage map was constructed using 191 amplified fragment length polymorphism (AFLP) and 4 microsatellite DNA markers. A total of 178 loci were mapped in 36 linkage groups comprising 1659.6 cM, which includes approximately 77.3% to 81.8% of the total genome. As the markers were randomly distributed over the genome, they showed high efficiency for the construction of a wide linkage map.
Keywords:AFLPs  ayu (Plecoglossus altivelis)  linkage map  microsatellite DNA.
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