Isolation of new microsatellite-containing sequences inAcanthopanax senticosus |
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Authors: | Joonki Kim Ki Wha Chung |
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Affiliation: | 1.Department of Biological Science,Kongju National University,Gongju,Korea |
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Abstract: | Microsatellite markers, also called simple sequence repeats (SSRs), are comprised of a 2-to 6-nucIeotide repeat motif. They are useful as molecular markers for genetic authentication, crop breeding programs, and linkage analysis for map-based cloning. From a microsatellite-enriched genomic library ofAcanthopanax senticosus, we identified 239 new microsatellite-containing sequences. The di-nucleotide repeat units were the most abundant (55.2%), followed by tri-nucleotide repeat units (24.6%). In detailed repeat structures, the (AG)n motif was most frequent (30.5%), followed by the (AC)n motif (21.7%). Heptaand octa-nucleotide repeat motifs were found in each single locus, and a total of 33 (13.8%) complex repeat structures were recorded. This is the first report of mass isolation of microsatellites via screening of anA. senticosus library, and may well provide information useful as a genetic resource for the further study ofA. senticosus. |
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