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Deletion of extra C-terminal segment and its effect on the function and structure of artemin
Authors:Shirzad Fatemeh  Sajedi Reza H  Shahangian S Shirin  Rasti Behnam  Mosadegh Bita  Taghdir Majid  Hosseinkhani Saman
Institution:a Department of Biology, Faculty of Science, Science and Research Branch, Islamic Azad University, Tehran, Iran
b Department of Biology, Faculty of Science, University of Guilan, Rasht, Iran
c Department of Biochemistry, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran
Abstract:Artemin acts as a molecular chaperone by protecting Artemia embryos undergoing encystment from damage, caused by heat or other forms of stress. According to the amino acid sequence alignment, although artemin shows a fair amount of homology with ferritin, it also contains an extra C-terminal. Analysis of the C-terminal extension of artemin model in previous studies has shown that there are some favorable interactions between this region and its surrounding cleft. In the current study we tried to investigate the role of this C-terminal in chaperone activity of artemin. This extra C-terminal (39 residues) was deleted and the truncated gene was cloned and expressed in Escherichia coli. According to in vivo chaperone-like activity studies, both full-length and C-terminal truncated artemin conferred thermotolerance on transfected E. coli cells. However, bacteria expressing truncated derivative of artemin was less resistant than those producing native artemin against heat. Moreover, the activity recovery on carbonic anhydrase (CA), as protein substrate, was less in the presence of truncated artemin than that of full-length artemin. The results demonstrated that C-terminal deletion decreases the ability of artemin for chaperone-like activity. Theoretical investigations showed that deletion of artemin C-terminal extension makes substantial structural alterations in a way that structural stability and overall integrity of artemin decrease.
Keywords:ASA  accessible surface area  CA  carbonic anhydrase  GdmCl  guanidinium chloride  IPTG  d-thiogalactopyranoside" target="_blank">isopropyl β-d-thiogalactopyranoside  LB  Luria-Bertani  MD  Molecular Dynamic  Ni-NTA  nickel-nitrilotriacetic acid  PCR  polymerase chain reaction  pNPAc  p-nitrophenyl acetate  sHP  small heat shock protein  SDS-PAGE  sodium dodecyl sulfate-polyacrylamide gel electrophoresis
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