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Bayesian spatial modeling of moose count data: increasing estimator efficiency and exploring ecological hypotheses
Authors:Joshua H Schmidt  Matthew D Cameron  Kyle Joly  Jordan M Pruszenski  Joel H Reynolds  Mathew S Sorum
Institution:1. U.S. National Park Service, Central Alaska Network, 4175 Geist Road, Fairbanks, AK, 99709 USA;2. U.S. National Park Service, Yukon-Charley Rivers National Preserve, 4175 Geist Road, Fairbanks, AK, 99709 USA;3. U.S. National Park Service, Climate Change Response Program, 1201 Oakridge Drive, Fort Collins, CO, 80525 USA
Abstract:Moose management throughout much of Alaska and Canada relies on aerial count data, which are commonly collected using the geospatial population estimator (GSPE) protocol. The GSPE uses a model-based analytical approach and finite-population block kriging to estimate abundance from a collection of sampled survey units. Widespread implementation and well-documented analytical software have resulted in reliable estimates of moose abundance, density, and composition across a large proportion of their range. Analysis is conducted almost exclusively using the GSPE software, which fits a fixed model structure to data collected within a single year. The downside of this approach to analysis is that the fixed model structure is inefficient for estimation, leading to more field effort than would otherwise be necessary to achieve a desired level of estimator precision. We developed a more easily modified and flexible Bayesian spatial general additive model approach (BSG) that accommodates spatial and temporal covariates (e.g., habitat characteristics, trend), multiple survey events, prior information, and incomplete detection. Using a series of 6 GSPE surveys conducted in Yukon-Charley Rivers National Preserve, Alaska, USA, from 2003–2019, we established the equivalence of the 2 approaches under similar model structures. We then extended the BSG to demonstrate how a more comprehensive approach to analysis can affect estimator precision and be used to assess ecological relationships. The precision of annual abundance estimators from the BSG were improved by an average of 43% over those based on the standard GSPE analysis, highlighting the very real costs of assuming a fixed (i.e., suboptimal) model structure. The population increased at a rate of 2.3%/year (95% CrI = 0.8–3.8%), and the increase was largely explained by a parallel increase in wildfire extent (i.e., high quality moose habitat). These results suggest that our approach could be used to increase estimator efficiency or decrease future survey costs without any modifications to the basic protocol. While modification of the GSPE software is possible, practitioners may find the BSG approach more convenient for quickly developing model structures for a particular application, thereby allowing them to extract more information from existing and future datasets.
Keywords:general additive model  geospatial population estimator  GSPE  habitat  kriging  moose  spatial model
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