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Integrative analyses of probiotics,pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)
Authors:Jacob Agerbo Rasmussen  Kasper Rømer Villumsen  Louise von Gersdorff Jørgensen  Torunn Forberg  Shaozhi Zuo  Per Walter Kania  Kurt Buchmann  Karsten Kristiansen  Anders Miki Bojesen  Morten Tønsberg Limborg
Institution:1. Laboratory of Genomics and Molecular Medicine, Department of Biology, University of Copenhagen, Copenhagen, Denmark;2. Department of Veterinary and Animal Sciences, Veterinary Clinical Microbiology, University of Copenhagen, Copenhagen, Denmark;3. Department of Veterinary and Animal Sciences, Parasitology and Aquatic Pathobiology, University of Copenhagen, Copenhagen, Denmark;4. BioMar RD, Trondheim, Norway;5. Laboratory of Genomics and Molecular Medicine, Department of Biology, University of Copenhagen, Copenhagen, Denmark

Institute of Metagenomics, Qingdao-Europe Advanced Institute for Life Sciences, Qingdao, BGI-Shenzhen, Shenzhen, China;6. Faculty of Health and Medical Sciences, Center for Evolutionary Hologenomics, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark

Abstract:
Keywords:aquaculture  biomarker predictions  host–microbiota interactions  infection  intestinal microbiology  modelling  probiotics  rainbow trout  Yersinia ruckeri
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