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Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks
Authors:Email author" target="_blank">Cecily?J?WolfeEmail author  Isaac?S?Kohane  Atul?J?Butte
Institution:(1) Children's Hospital Informatics Program and Harvard MIT Division of Health Sciences and Technology, 300 Longwood Avenue, Boston, MA 02115, USA;(2) Hawaii Institute of Geophysics and Planetology, University of Hawaii at Manoa, 1680 East West Road, Honolulu, HI 96822, USA;(3) Stanford Medical Informatics, Department of Medicine and Pediatrics, Stanford University School of Medicine, 251 Campus Drive, Room X-215, Stanford, CA 94305-5479, USA
Abstract:

Background  

Biological processes are carried out by coordinated modules of interacting molecules. As clustering methods demonstrate that genes with similar expression display increased likelihood of being associated with a common functional module, networks of coexpressed genes provide one framework for assigning gene function. This has informed the guilt-by-association (GBA) heuristic, widely invoked in functional genomics. Yet although the idea of GBA is accepted, the breadth of GBA applicability is uncertain.
Keywords:
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