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StrainInfo introduces electronic passports for microorganisms
Authors:Bert Verslyppe  Wim De Smet  Bernard De Baets  Paul De Vos  Peter Dawyndt
Institution:1. Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium;2. Laboratory of Microbiology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium;3. Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Coupure links 653, 9000 Ghent, Belgium;4. BCCM™/LMG Bacteria Collection, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
Abstract:Microbiology builds upon biological material deposited in biological resource centers (BRCs) as a reference framework for collaborative research. BRCs assign so-called strain numbers to label the deposited material and are responsible for long-term preservation and worldwide distribution of the material. Cultured microorganisms can be deposited into multiple BRCs and BRCs also mutually exchange their holdings. As a result, many different strain numbers can be attached to biological material that stems from the same isolate. In practice, this material is considered equivalent and used interchangeably. This implies that finding information on given biological material requires all equivalent strain numbers to be used when searching.
Keywords:StrainInfo  Strain passport  Strain browser  Biological resource center  Semantic integration
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