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Polymorphism analysis in genes of the somatotropic axis in Nellore cattle selected for growth
Authors:Diercles Francisco Cardoso  Fábio Ricardo Pablos de Souza  Gregório Miguel Ferreira de Camargo  Patrícia Dias da Silva Fonseca  Larissa Fernanda Simielli Fonseca  Camila Urbano Braz  Arione Augusti Boligon  Maria Eugênia Zerlotti Mercadante  Lucia Galvão de Albuquerque  Humberto Tonhati
Institution:1. São Paulo State University, Jaboticabal, SP, Brazil;2. Instituto de Zootecnia, Centro APTA Bovinos de Corte, Sertãozinho, SP, Brazil
Abstract:The somatotropic axis consists of genes that are involved in muscular development. These genes are potential regions of study to identify possible QTL for economically important traits in beef cattle. The aim of this study was to verify the existence of GH1, POU1F1, and GHR polymorphisms in Nellore cattle to verify the influence of selection in these mutations and to analyse the association between molecular markers and body weight at different ages, yearling hip height, carcass fat thickness and loin eye area. Six hundred forty-five animals from the Centro APTA Bovinos de Corte, were genotyped by PCR–RFLP techniques. The association analyses were performed with general mixed models taking into consideration the effect of one marker, and other model taking into consideration interactions between two molecular markers. Only the molecular markers rs81109601 on GH1 and rs109136815 on GHR were polymorphic; however, they were not found to be under selection. The association of the GHR rs109136815 marker and loin eye area was observed (p < 0.05), as well as the effect of interaction between the markers and the female body weight at 550 days of age (p < 0.04). The interaction effect should be considered in situations where the interactivity between two genes is known.
Keywords:A>  G  substitution adenosine by guanosine  BF  back fat thickness  BW  body weight  C>  A  substitution of cytidine by adenosine  GH  growth hormone protein  GH1  growth hormone gene  GHR  growth hormone receptor gene  H378  hip height measured in 378   days  H550  hip height measured in 550   days  LMA  loin eye area of longissimus muscle  NeC  line of selection named Nellore control  NeS  line of selection named Nellore selection  NeT  line of selection named Nellore traditional  POU1F1  POU class 1 homeobox 1 gene  QTL  quantitative trait loci  RF  rump fat thickness  T>  C  substitution of thymidine by cytidine  W210  weaning body adjust to 210   days  W378  weaning body adjust to 378   days  W550  weaning body adjust to 550   days
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