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CART算法在原发性肝癌放疗后HBV再激活的应用
引用本文:吴冠朋,黄伟,刘毅慧.CART算法在原发性肝癌放疗后HBV再激活的应用[J].生物信息学,2017,15(3):164-170.
作者姓名:吴冠朋  黄伟  刘毅慧
作者单位:齐鲁工业大学 信息学院, 济南 250353,山东省肿瘤医院放疗病区, 济南 250117,齐鲁工业大学 信息学院, 济南 250353
基金项目:国家自然科学基金(8,3);山东省自然科学基金(ZR2013FM020).
摘    要:为了建立乙型肝炎病毒(Hepatitis B virus,HBV)再激活的预测模型,提出CART(classification and regression tree)特征选择方法应用在原发性肝癌患者精确放疗后HBV再激活的危险因素分析中,进而建立基于CART和Bayes算法的HBV再激活预测模型。实验结果显示:CART算法划分了多组具有优秀分类能力的特征节点集(危险因素),尤其当特征节点集为HBV DNA水平、外放边界、放疗总剂量、V20和KPS评分时,在CART和Bayes预测模型中的分类正确性分别为88.51%和86.69%,得到HBV再激活正确性贡献度的排序为KPS评分全肝平均剂量V20放疗总剂量V10;当甲胎蛋白AFP出现时,增加了HBV再激活的预测正确性。

关 键 词:CART  特征选择  乙肝病毒再激活  危险因素  Bayes
收稿时间:2016/12/23 0:00:00
修稿时间:2017/2/18 0:00:00

Application of HBV reactivation in primary liver carcinoma after radiotherapy based on CART algorithm
WU Guanpeng,HUANG Wei and LIU Yihui.Application of HBV reactivation in primary liver carcinoma after radiotherapy based on CART algorithm[J].China Journal of Bioinformation,2017,15(3):164-170.
Authors:WU Guanpeng  HUANG Wei and LIU Yihui
Institution:School of Information, Qilu University of Technology, Jinan 250353,China,Department of Radiation Oncology, Shandong Cancer Hospital, Jinan 250117, China and School of Information, Qilu University of Technology, Jinan 250353,China
Abstract:To establish an excellent prediction model for Hepatitis B virus reactivation, the CART (classification and regression tree) feature selection method was applied to analyze the risk factors of Hepatitis B virus(HBV) reactivation in patients with primary liver cancer after precise radiotherapy, and then a prediction model of HBV reactivation was established based on CART and Bayes algorithm. The experimental results show that the CART algorithm split multiple sets of feature nodes(risk factors) with excellent classification ability. Especially when the feature set of nodes includes HBV DNA level, outer margin of radiotherapy, the total dose of radiotherapy, V20 and KPS score, the classification accuracy of CART and Bayes prediction models was 88.51% and 86.69% respectively. The decreasing order of accuracy contribution of HBV reactivation was: KPS score,mean dose of liver,V20, the total dose of radiotherapy and V10. The predictive accuracy of HBV reactivation was increased when the alpha-fetoprotein AFP appeared.
Keywords:CART  feature selection  HBV reactivation  Risk factors  Bayes
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