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Site-directed mutagenesis to determine essential residues of ribulose-bisphosphate carboxylase ofRhodospirillum rubrum
Authors:Salil K. Niyogi  Thomas S. Soper  Robert S. Foote  Frank W. Larimer  Richard J. Mural  Sankar Mitra  Eva H. Lee  Richard Machanoff  Fred C. Hartman
Affiliation:(1) The Protein Engineering and Molecular Mutagenesis Program of the Biology Division, Oak Ridge National Laboratory, 37831 Oak Ridge, Tennessee, USA
Abstract:Both Lys-166 and His-291 of ribulosebisphosphate carboxylase/oxygenase fromRhodospirillum rubrum have been implicated as the active-site residue that initiates catalysis. To decide between these two candidates, we resorted to site-directed mutagenesis to replace Lys-166 and His-291 with several amino acids. All 7 of the position-166 mutants tested are severely deficient in carboxylase activity, whereas the alanine and serine mutants at position 291 are ∼40% and ∼18% as active as the native carboxylase, essentially ruling out His-291 in theRhodospirillum rubrum carboxylase (and by inference His-298 in the spinach enzyme) as a catalytically essential residue. The ability of some of the mutant proteins to undergo carbamate formation or to bind either ribulosebisphosphate or a transition-state analogue remains largely unimpaired. This implies that Lys-166 is not required for substrate binding; rather, the results corroborate the earlier postulate that Lys-166 functions as an acid-base group in catalysis or in stabilizing a transition state in the reaction pathway.
Keywords:203-214Ribulose-P2 carboxylase  site-directed mutagenesis  essentiality of Lys-166  non-essentiality of His-291
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