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HyPhy: hypothesis testing using phylogenies
Authors:Pond Sergei L Kosakovsky  Frost Simon D W  Muse Spencer V
Institution:Antiviral Research Center, University of California San Diego San Diego, CA 92103, USA.
Abstract:SUMMARY: The HyPhypackage is designed to provide a flexible and unified platform for carrying out likelihood-based analyses on multiple alignments of molecular sequence data, with the emphasis on studies of rates and patterns of sequence evolution. AVAILABILITY: http://www.hyphy.org CONTACT: muse@stat.ncsu.edu SUPPLEMENTARY INFORMATION: HyPhydocumentation and tutorials are available at http://www.hyphy.org.
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