H2S degradation is reflected by both the activity and composition of the microbial community in a compost biofilter

In this study, 16S rRNA- and rDNA-based denaturing gradient gel electrophoresis (DGGE) were used to study the temporal and spatial evolution of the microbial communities in a compost biofilter removing H₂S and in a control biofilter without H₂S loading. During the first 81 days of the experiment, the H₂S removal efficiencies always exceeded 93% at loading rates between 4.1 and 30 g m⁻³ h⁻¹. Afterwards, the H₂S removal efficiency decreased to values between 44 and 71%. RNA-based DGGE analysis showed that H₂S loading to the biofilter increased the stability of the active microbial community but decreased the activity-based diversity and evenness. The most intense band in both the RNA- and DNA-based DGGE patterns of the H₂S-degrading biofilter represented the sulfur oxidizing bacterium Thiobacillus thioparus. This suggested that T. thioparus constituted a major part of the bacterial community and was an important primary degrader in the H₂S-degrading biofilter. The decreasing H₂S removal efficiencies near the end of the experiment were not accompanied by a substantial change of the DGGE patterns. Therefore, the decreased H₂S removal was probably not caused by a failing microbiology but rather by a decrease of the mass transfer of substrates after agglutination of the compost particles.