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The Use of the [13C]/[12C] Ratio for the Assay of the Microbial Oxidation of Hydrocarbons
Authors:Zyakun  A. M.  Kosheleva  I. A.  Zakharchenko  V. N.  Kudryavtseva  A. I.  Peshenko  V. A.  Filonov  A. E.  Boronin  A. M.
Affiliation:(1) Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, pr. Nauki 5, Pushchino, Moscow oblast, 142290, Russia
Abstract:The study deals with a comparative analysis of the relative abundances of the carbon isotopes 12C and 13C in the metabolites and biomass of the Burkholderia sp. BS3702 and Pseudomonas putida BS202-p strains capable of utilizing aliphatic (n-hexadecane) and aromatic (naphthalene) hydrocarbons as sources of carbon and energy. The isotope compositions of the carbon dioxide, biomass, and exometabolites produced during the growth of Burkholderia sp. BS3702 on n-hexadecane (delta13C = –44.6 ± 0.2permil) were characterized by the values of delta13CCO2 = –50.2 ± 0.4permil, delta13Cbiom = –46.6 ± 0.4permil, and delta13Cexo = –41.5 ± 0.4permil, respectively. The isotope compositions of the carbon dioxide, biomass, and exometabolites produced during the growth of the same bacterial strain on naphthalene (delta13C = –21 ± 0.4permil) were characterized by the isotope effects delta13CCO2 = –24.1 ± 0.4permil, delta13Cbiom = –19.2 ± 0.4permil, and delta13Cexo = –19.1 ± 0.4permil, respectively. The possibility of using the isotope composition of metabolic carbon dioxide for the rapid monitoring of the microbial degradation of petroleum hydrocarbons in the environment is discussed.
Keywords:naphthalene  n-hexadecane  Burkholderia sp.  Pseudomonas putida  fractionation of carbon isotopes
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