FUNGALOXPHOS: An integrated database for oxidative phosphorylation in fungi |
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| Authors: | José L. Lavín Marina Marcet-Houben Raquel L. Gutiérrez-Vázquez Lucía Ramírez Antonio G. Pisabarro Toni Gabaldón José A. Oguiza |
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| Affiliation: | 1. Genetics and Microbiology Research Group, Departamento de Producción Agraria, Universidad Pública de Navarra, 31006 Pamplona, Spain;2. Bioinformatics and Genomics Programme, Centre for Genomic Regulation (CRG), Doctor Aiguader 88, 08003 Barcelona, Spain;3. Universitat Pompeu Fabra (UPF), Barcelona, Spain;4. Independent Scholar, Bilbao, Spain |
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| Abstract: | The oxidative phosphorylation (OXPHOS) system is the main energy-producing pathway in aerobic organisms. Here we present FUNGALOXPHOS, a web based platform that stores OXPHOS proteins encoded in fungal nuclear genomes and that incorporates tools for the extraction, classification and bioinformatic screening of all the putative nuclear encoded fungal OXPHOS proteins. FUNGALOXPHOS includes local, parsing and remote tools that allow exploring the properties of OXPHOS proteins in fungal genomes. FUNGALOXPHOS is freely available on the web at http://bioinformatics.unavarra.es:1000/FUNGALOXPHOS_CSS/main.html. |
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