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FunSys: Software for functional analysis of prokaryotic transcriptome and proteome |
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| Authors: | Pablo de Sá Anne Pinto Rommel Thiago Jucá Ramos Nilson Coimbra Rafael Baraúna Hivana Dall'agnol Adriana Carneiro Alex Ranieri Agenor Valadares Vasco Azevedo Maria Paula Schneider Debmalya Barh Artur Silva |
| Affiliation: | 1Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém-PA, Brazil;2Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte-MG, Brazil;3Centre for Genomics and Applied Gene Technology, Institute of Integrative Omics and Applied Biotechnology (IIOAB), Nonakuri, Purba Medinipur, WB-721172, India |
| Abstract: | The vast amount of data produced by next-generation sequencing (NGS) has necessitated the development of computational tools to assist in understanding the myriad functions performed by the biological macromolecules involved in heredity. In this work, we developed the FunSys programme, a stand-alone tool with an user friendly interface that enables us to evaluate and correlate differential expression patterns from RNA sequencing and proteomics datasets. The FunSys generates charts and reports based on the results of the analysis of differential expression to aid the interpretation of the results. AVAILABILITY: The database is available for free at https://sourceforge.net/projects/funsysufpa/ |
| Keywords: | Next-generation sequencing Gene expression Bioinformatics Software |
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