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SecA, the motor of the secretion machine, binds diverse partners on one interactive surface
Authors:Cooper Dylan B  Smith Virginia F  Crane Jennine M  Roth Hilary C  Lilly Angela A  Randall Linda L
Affiliation:Department of Biochemistry, 117 Schweitzer Hall, University of Missouri, Columbia, MO 65211, USA
Abstract:In all living cells, regulated passage across membranes of specific proteins occurs through a universally conserved secretory channel. In bacteria and chloroplasts, the energy for the mechanical work of moving polypeptides through that channel is provided by SecA, a regulated ATPase. Here, we use site-directed spin labeling and electron paramagnetic resonance spectroscopy to identify the interactive surface used by SecA for each of the diverse binding partners encountered during the dynamic cycle of export. Although the binding sites overlap, resolution at the level of aminoacyl side chains allows us to identify contacts that are unique to each partner. Patterns of constraint and mobilization of residues on that interactive surface suggest a conformational change that may underlie the coupling of ATP hydrolysis to precursor translocation.
Keywords:EPR, electron paramagnetic resonance   CPK, Corey-Pauling-Koltun   NBF, nucleotide binding fold   PBD, precursor binding domain   HSD, helical scaffold domain   NBD, nucleotide binding domain   EGTA, ethylene glycol bis(β-aminoethyl ether)N,N&prime  -tetraacetic acid   PDB, Protein Data Bank
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