Whole genome transcriptome polymorphisms in Arabidopsis thaliana |
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| Authors: | Xu Zhang Jake K Byrnes Thomas S Gal Wen-Hsiung Li Justin O Borevitz |
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| Affiliation: | 1. Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, Section of Molecular Genetics and Microbiology, University of Texas at Austin, 1 University Station A4800, 78712, Austin, Texas, USA
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| Abstract: | ArrayPlex is a software package that centrally provides a large number of flexible toolsets useful for functional genomics, including microarray data storage, quality assessments, data visualization, gene annotation retrieval, statistical tests, genomic sequence retrieval and motif analysis. It uses a client-server architecture based on open source components, provides graphical, command-line, and programmatic access to all needed resources, and is extensible by virtue of a documented application programming interface. ArrayPlex is available at http://sourceforge.net/projects/arrayplex/. |
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