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A new molecular evolution model for limited insertion independent of substitution
Authors:Sophie Lè  bre,Christian J. Michel
Affiliation:Equipe de Bioinformatique Théorique, BFO, ICube, Université de Strasbourg, CNRS, 300 Boulevard Sébastien Brant, 67400 Illkirch, France
Abstract:We recently introduced a new molecular evolution model called the IDIS model for Insertion Deletion Independent of Substitution  and . In the IDIS model, the three independent processes of substitution, insertion and deletion of residues have constant rates. In order to control the genome expansion during evolution, we generalize here the IDIS   model by introducing an insertion rate which decreases when the sequence grows and tends to 0 for a maximum sequence length nmaxnmax.
Keywords:Evolution models   Substitution   Limited insertion   Sequence length   Sequence content   GC content
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