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Chromatin stiffening underlies enhanced locus mobility after DNA damage in budding yeast
Authors:Mickaël Lelek  Adeline Veillet  Benoît Lelandais  Jyotsana Parmar  Fabiola García Fernández  Etienne Almayrac  Yasmine Khalil  Eleonore Birgy  Emmanuelle Fabre  Christophe Zimmer
Institution:1. Unité Imagerie et Modélisation, Institut Pasteur, Paris, France;2. CNRS UMR 3691, C3BI, USR 3756 IP CNRS, Paris, France;3. Université Paris Diderot, Sorbonne Paris Cité, Paris, France;4. Equipe Biologie et Dynamique des Chromosomes, Institut Universitaire d'Hématologie, H?pital St. Louis, Paris, France;5. CNRS UMR 7212, INSERM U944, IUH, Université Paris Diderot, Sorbonne Paris Cité, Paris, France;6. CNRS UMR 7212, INSERM U944, IUH, Université Paris Diderot, Sorbonne Paris Cité, Paris, FranceThese authors contributed equally to this work;7. Université Paris Diderot, Sorbonne Paris Cité, Paris, FranceThese authors contributed equally to this work
Abstract:DNA double‐strand breaks (DSBs) induce a cellular response that involves histone modifications and chromatin remodeling at the damaged site and increases chromosome dynamics both locally at the damaged site and globally in the nucleus. In parallel, it has become clear that the spatial organization and dynamics of chromosomes can be largely explained by the statistical properties of tethered, but randomly moving, polymer chains, characterized mainly by their rigidity and compaction. How these properties of chromatin are affected during DNA damage remains, however, unclear. Here, we use live cell microscopy to track chromatin loci and measure distances between loci on yeast chromosome IV in thousands of cells, in the presence or absence of genotoxic stress. We confirm that DSBs result in enhanced chromatin subdiffusion and show that intrachromosomal distances increase with DNA damage all along the chromosome. Our data can be explained by an increase in chromatin rigidity, but not by chromatin decondensation or centromeric untethering only. We provide evidence that chromatin stiffening is mediated in part by histone H2A phosphorylation. Our results support a genome‐wide stiffening of the chromatin fiber as a consequence of DNA damage and as a novel mechanism underlying increased chromatin mobility.
Keywords:chromatin dynamics  chromatin structure  DNA damage  polymers  yeast
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