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A maximum likelihood approach to non-linear ordination
Authors:Robert W Johnson  David W Goodall
Institution:(1) Queensland Herbarium, 4068 Indooroopilly, Qld., Australia;(2) CSIRO Division of Land Resources Management, 6014 Wembley, W.A., Australia
Abstract:Summary A non-linear method of ordinating vegetation samples based on the fitting of bell-shaped response curves is lescribed. For each species two Gaussian curves were itted, one to quantitative values, where the species was present, the other to probabilities of absence. A maximum likelihood approach was then used to obtain a lsquobestrsquo approximation of the positions of the samples along a one-dimensional gradient. By an iterative process successively better approximations were obtained.The method was successful in recovering gradients based on hypothetical data. With two sets of real data the gradient produced was more ecologically satisfying and far less distorted than that revealed by principal component analysis.
Keywords:Maximum likelihood  Multivariate methods  Non-linear ordination  Principal component analysis
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