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The structural basis of allosteric regulation in proteins
Authors:Roman A Laskowski  Fabian Gerick
Institution:European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, United Kingdom
Abstract:Allosteric regulation of protein function occurs when the regulatory trigger, such as the binding of a small-molecule effector or inhibitor, takes place some distance from the protein’s, or protein complex’s, active site. This distance can be a few Å, or tens of Å. Many proteins are regulated in this way and exhibit a variety of allosteric mechanisms. Here we review how analyses of experimentally determined models of protein 3D structures, using either X-ray crystallography or NMR spectroscopy, have revealed some of the mechanisms involved.
Keywords:BoNT/A  botulinum neurotoxin type A  CAK  CDK-activating kinase  CDK  cyclin-dependent kinase  DAHP  d-arbino-heptulosonate-7-phosphate" target="_blank">3-deoxy-d-arbino-heptulosonate-7-phosphate  DAHPS  DAHP synthase  DBD  DNA-binding domain  DHDPS  dihydrodipicolinate synthase  DHFR  dihydrofolate reductase  E4P  d-erythrose-4-phosphate" target="_blank">d-erythrose-4-phosphate  FlAsH  fluorescin arsenical hairpin binder  hPTP1E  human tyrosine phosphatase 1E  KNF  Koshland  Nemethy and Filmer model  MWC  Monod  Wyman and Changeux model  NBD  nucleotide binding domain  PDB  Protein Data Bank  PEP  phosphoenolpyruvate  PGDH  phosphoglycerate dehydrogenase  PTS  phosphotransferase system  RBD  regulatory binding domain  SBD  substrate binding domain
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