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Methods for structural characterization of prefibrillar intermediates and amyloid fibrils
Authors:Annette Eva Langkilde
Institution:a Department of Medicinal Chemistry, Faculty of Pharmaceutical Sciences, University of Copenhagen, Universitetsparken 2, DK-2100 Copenhagen, Denmark
b Department of Pharmaceutics and Analytical Chemistry, Faculty of Pharmaceutical Sciences, University of Copenhagen, Universitetsparken 2, DK-2100 Copenhagen, Denmark
Abstract:Protein fibrillation is first and foremost a structural phenomenon. Adequate structural investigation of the central conformational individuals of the fibrillation process is however exceedingly difficult. This is due to the nature of the process, which may be described as a dynamically evolving equilibrium between a large number of structural species. These are furthermore of highly diverging sizes and present in very uneven amounts and timeframes. Different structural methods have different strengths and limitations. These, and in particular recent advances within solution analysis of the undisturbed equilibrium using small angle X-ray scattering, are reviewed here.
Keywords:3-D  three dimensional    amyloid β  AFM  atomic force microscopy  CD  circular dichroism  EM  electron microscopy  EOM  ensemble optimization method  FTIR  fourier-transform infrared spectroscopy  NMR  nuclear magnetic resonance (spectroscopy)  SANS  small-angle neutron scattering  SAS  small-angle scattering  SAXS  small-angle X-ray scattering  ss-NMR  solid-state NMR  STEM  scaning tunneling electron microscopy  ThT  thioflavin T  TTR  transthyretin  WAXS  wide-angle X-ray scattering
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