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The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex
Authors:Takeshi Hiromoto  Oliver Pilak  Marco Salomone Stagni  Eberhard Warkentin  Seigo Shima  Ulrich Ermler
Institution:a Max-Planck-Institut für Terrestrische Mikrobiologie, Karl-von-Frisch-Straße, D-35043 Marburg, Germany
b Bielefeld University, Department of Chemistry, Universitätsstraße 25, D-33615 Bielefeld, Germany
c EMBL Hamburg, Notkestraße. 85, D-22603 Hamburg, Germany
d Max-Planck-Institut für Biophysik, Max-von-Laue-Straße 3, D-60438 Frankfurt/Main, Germany
Abstract:Fe]-hydrogenase is one of three types of enzymes known to activate H2. Crystal structure analysis recently revealed that its active site iron is ligated square-pyramidally by Cys176-sulfur, two CO, an “unknown” ligand and the sp2-hybridized nitrogen of a unique iron-guanylylpyridinol-cofactor. We report here on the structure of the C176A mutated enzyme crystallized in the presence of dithiothreitol (DTT). It suggests an iron center octahedrally coordinated by one DTT-sulfur and one DTT-oxygen, two CO, the 2-pyridinol’s nitrogen and the 2-pyridinol’s 6-formylmethyl group in an acyl-iron ligation. This result led to a re-interpretation of the iron ligation in the wild-type.
Keywords:methenyl-H4MPT+  methenyl-tetrahydromethanopterin  methylene-H4MPT  methylene-tetrahydromethanopterin  FeGP  iron-guanylylpyridinol  EXAFS  extended X-ray absorption fine structure  ATR-IR  attenuated total reflection infrared  DTT  dithiothreitol  r  m  s    root-mean-square  GP  guanylylpyridinol
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