Genetic diversity within and among populations of Shorea leprosula Miq. and Shorea parvifolia Dyer (Dipterocarpaceae) in Indonesia detected by AFLPs |
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Authors: | Cui-Ping Cao Reiner Finkeldey Iskandar Zulkarnaen Siregar Ulfah Juniarti Siregar Oliver Gailing |
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Institution: | 1. Institute of Forest Genetics and Forest Tree Breeding, Faculty of Forest Sciences and Forest Ecology, University of G?ttingen, Büsgenweg-2, 37077, G?ttingen, Germany 2. Institute Pertanian Bogor, Faculty of Forestry, Bogor Agricultural University, Darmaga Campus, Bogor, Indonesia
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Abstract: | The genetic diversity within and among populations of Shorea leprosula and Shorea parvifolia from Indonesia was investigated using amplified fragment length polymorphisms (AFLPs). The results indicated that S. leprosula is genetically more variable than S. parvifolia. At the population level, a higher level of genetic diversity was revealed for S. leprosula with a percentage of polymorphic loci (PPLp) of 53.32% and an expected heterozygosity (H
ep) of 0.16 in comparison with S. parvifolia showing PPLp of 51.79% and H
ep of 0.14. At the species level, S. leprosula showed PPLs of 92.86% and H
es of 0.21, while S. parvifolia showed PPLs of 85.71% and H
es of 0.21. Genetic differentiation (G
st) indicated that 25 and 31% of total genetic diversity in S. leprosula and S. parvifolia, respectively, were attributed to the differences among populations. An analysis of molecular variance (AMOVA) at two hierarchical levels exhibited that most genetic variation resided within populations with proportion of 70.2% for S. leprosula and 66.2% for S. parvifolia. The AMOVA at three hierarchical levels performed for S. leprosula and S. parvifolia together revealed that the genetic difference between the two species was remarkably higher with a proportion of 44.1% than the differences within and among populations (38.1 and 17.8%, respectively). The genetic differentiation between islands was significant for S. leprosula but not for S. parvifolia. The observed genetic diversity agreed with the life history traits of Shorea species. Highly differentiating individual AFLP markers were found for each species, which will serve as diagnostic markers for the identification of wood of different species, from different islands and regions. |
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Keywords: | AFLP Conservation Genetic diversity Shorea leprosula S parvifola Tropical rainforests |
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