Tools for automated acoustic monitoring within the R package monitoR |
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| Authors: | Jonathan Katz Sasha D Hafner Therese Donovan |
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| Institution: | 1. Vermont Cooperative Fish and Wildlife Research Unit, University of Vermont, Burlington, VT, USA.;2. Institute of Chemical Engineering, Biotechnology and Environmental Technology, University of Southern Denmark, Odense M, Denmark.;3. U.S. Geological Survey, Vermont Cooperative Fish and Wildlife Research Unit, University of Vermont, Burlington, VT, USA. |
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| Abstract: | The R package monitoR contains tools for managing an acoustic-monitoring program including survey metadata, template creation and manipulation, automated detection and results management. These tools are scalable for use with small projects as well as larger long-term projects and those with expansive spatial extents. Here, we describe typical workflow when using the tools in monitoR. Typical workflow utilizes a generic sequence of functions, with the option for either binary point matching or spectrogram cross-correlation detectors. |
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| Keywords: | Acoustics spectrogram correlation matching template matching template detection wildlife monitoring |
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