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DDESC: Dragon database for exploration of sodium channels in human
Authors:Sunil Sagar  Mandeep Kaur  Adam Dawe  Sundararajan Vijayaraghava Seshadri  Alan Christoffels  Ulf Schaefer  Aleksandar Radovanovic  Vladimir B Bajic
Affiliation:1. Genetic Unit, IRCCS Burlo Garofolo and Department of Reproductive and Developmental Sciences, University of Trieste, Trieste, Italy
2. Department of Biochemistry, Biophysics and Macromolecular Chemistry, University of Trieste, Trieste, Italy
3. Department of Genetics, University of Trieste, Recife, Brazil
Abstract:

Background

Hepcidin/LEAP-1 is an iron regulatory hormone originally identified as an antimicrobial peptide. As part of a systematic analysis of the evolution of host defense peptides in primates, we have sequenced the orthologous gene from 14 species of non-human primates.

Results

The sequence of the mature peptide is highly conserved amongst all the analyzed species, being identical to the human one in great apes and gibbons, with a single residue conservative variation in Old-World monkeys and with few substitutions in New-World monkeys.

Conclusion

Our analysis indicates that hepcidin's role as a regulatory hormone, which involves interaction with a conserved receptor (ferroportin), may result in conservation over most of its sequence, with the exception of the stretch between residues 15 and 18, which in New-World monkeys (as well as in other mammals) shows a significant variation, possibly indicating that this structural region is involved in other functions.
Keywords:
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