Thermal phase and excitonic connectivity in fluorescence induction

Chl fluorescence induction (FI) was recorded in sunflower leaves pre-adapted to darkness or low preferentially PSI light, or inhibited by DCMU. For analysis the FI curves were plotted against the cumulative number of excitations quenched by PSII, n _q, calculated as the cumulative complementary area above the FI curve. In the +DCMU leaves n _q was <1 per PSII, suggesting pre-reduction of Q _A during the dark pre-exposure. A strongly sigmoidal FI curve was constructed by complementing (shifting) the recorded FI curves to n _q = 1 excitation per PSII. The full FI curve in +DCMU leaves was well fitted by a model assuming PSII antennae are excitonically connected in domains of four PSII. This result, obtained by gradually reducing Q _A in PSII with pre-blocked Q _B (by DCMU or PQH₂), differs from that obtained by gradually blocking the Q _B site (by increasing DCMU or PQH₂ level) in leaves during (quasi)steady-state e^? transport (Oja and Laisk, Photosynth Res 114, 15–28, 2012). Explanations are discussed. Donor side quenching was characterized by comparison of the total n _q in one and the same dark-adapted leaf, which apparently increased with increasing PFD during FI. An explanation for the donor side quenching is proposed, based on electron transfer from excited P680* to oxidized tyrosine Z (TyrZ^ox). At high PFDs the donor side quenching at the J inflection of FI is due mainly to photochemical quenching by TyrZ^ox. This quenching remains active for subsequent photons while TyrZ remains oxidized, following charge transfer to Q _A. During further induction this quenching disappears as soon as PQ and Q _A become reduced, charge separation becomes impossible and TyrZ is reduced by the water oxidizing complex.