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Recrafting the neighbor-joining method |
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| Authors: | Thomas Mailund Gerth S Brodal Rolf Fagerberg Christian NS Pedersen Derek Phillips |
| Affiliation: | (1) Bioinformatics Research Center (BiRC), University of Aarhus, Aarhus, Denmark;(2) Basic Research in Computer Sciences (BRICS) Department of Computer Science, University of Aarhus, Aarhus, Denmark;(3) Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark;(4) Department of Computer Science, University of Aarhus, Aarhus, Denmark;(5) School of Computer Science, University of Waterloo, Ontario, Canada |
| Abstract: | BackgroundThe neighbor-joining method by Saitou and Nei is a widely used method for constructing phylogenetic trees. The formulation of the method gives rise to a canonical Θ(n 3) algorithm upon which all existing implementations are based. |
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