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Functionalization of the Oligonucleotides Containing an Internucleotide Phosphoramidate Bond
Authors:Sinyakov  A. N.  Boutorine  A. S.  Novopashina  D. S.  Halby  L.  Ryabinin  V. A.
Affiliation:(1) Vector State Research Center of Virology and Biotechnology, Institute of Molecular Biology, pos. Kol'tsovo, Novosibirsk oblast, 630559, Russia;(2) INSERM U565–CNRS UMR 8646, Muséum National d'Histoire Naturelle, Laboratoire de Biophysique, 43 rue Cuvier, 75231 Paris Cedex 05, France;(3) Novosibirsk Institute of Bioorganic Chemistry, Siberian Division, Russian Academy of Sciences, pr. Akademika Lavrent'eva 8, Novosibirsk, 630090, Russia
Abstract:A new method for functionalization of oligonucleotides by addition of aminoalkyl derivatives to the intermolecular phosphorus atom of the oligonucleotide N3"–P5" phosphoramidate bond in the presence of triphenylphosphine, 4-dimethylaminopyridine, and 2,2"-dipyridyl disulfide was suggested. The reaction proceeded with both low-molecular alkylamines (1,6-diaminohexane or N,N-dimethyl-1,3-diaminopropane) and a minor groove binder containing an aminoalkyl group.
Keywords:minor groove binder  modified oligonucleotides  phosphoramidate
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