Insights into plastome of Fagonia indica Burm.f. (Zygophyllaceae): organization,annotation and phylogeny |
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| Authors: | Mohamed S Elshikh Mohammad Ajmal Ali Fahad Al-Hemaid Soo Yong Kim Meena Elangbam Arun Bahadur Gurung Prasanjit Mukherjee Mohamed El-Zaidy Joongku Lee |
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| Institution: | 1. Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;2. International Biological Material Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea;3. Genetics Laboratory, Centre of Advanced Studies in Life Sciences, Manipur University, Canchipur 795 003, India;4. Department of Basic Sciences and Social Sciences, North-Eastern Hill University, Shillong-793022, Meghalaya, India;5. Department of Botany, Kumar Kalidas Memorial College, Pakur-816107, Jharkhand, India;6. Department of Environment and Forest Resources, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Republic of Korea |
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| Abstract: | The enhanced understanding of chloroplast genomics would facilitate various biotechnology applications; however, the chloroplast (cp) genome / plastome characteristics of plants like Fagonia indica Burm.f. (family Zygophyllaceae), which have the capability to grow in extremely hot sand desert, have been rarely understood. The de novo genome sequence of F. indica using the Illumina high-throughput sequencing technology determined 128,379 bp long cp genome, encode 115 unique coding genes. The present study added the evidence of the loss of a copy of the IR in the cp genome of the taxa capable to grow in the hot sand desert. The maximum likelihood analysis revealed two distinct sub-clades i.e. Krameriaceae and Zygophyllaceae of the order Zygophyllales, nested within fabids. |
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| Keywords: | Zygophyllaceae NGS Plastome Fabids |
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