Crystal structure and biochemical studies of Brucella melitensis 5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Authors: | Xusheng Kang Yan Zhao Daohua Jiang Xuemei Li Xianping Wang Yan Wu Zeliang Chen Xuejun C. Zhang |
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Affiliation: | 1. National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China;2. University of Chinese Academy of Sciences, Beijing 100049, China;3. Food Science and Engineering College, Beijing University of Agriculture, Beijing 102206, China;4. Department of Infectious Disease Control, Institute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China |
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Abstract: | The prokaryotic 5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTAN) catalyzes the irreversible cleavage of the glycosidic bond in 5′-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH), a process that plays a key role in several metabolic pathways. Its absence in all mammalian species has implicated this enzyme as a promising target for antimicrobial drug design. Here, we report the crystal structure of BmMTAN in complex with its product adenine at a resolution of 2.6 Å determined by single-wavelength anomalous dispersion method. 11 key residues were mutated for kinetic characterization. Mutations of Tyr134 and Met144 resulted in the largest overall increase in Km, whereas mutagenesis of residues Glu18, Glu145 and Asp168 completely abolished activity. Glu145 and Asp168 were identified as active site residues essential for catalysis. The catalytic mechanism and implications of this structure for broad-based antibiotic design are discussed. |
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Keywords: | BmMTAN, Brucella melitensis MTAN INT, 2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyltetrazolium chloride MTA, 5&prime -methylthioadenosine MTAN, MTA/SAH nucleosidase NP-1, nucleoside phosphorylase-1 PDB, Protein Data Bank PEG, polyethylene glycol r.m.s.d., root mean square deviation SAD, single-wavelength anomalous diffraction SAH, S-adenosylhomocysteine SeMet, seleno-methionine WT, wild-type |
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