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Crystal structure and biochemical studies of Brucella melitensis 5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Authors:Xusheng Kang  Yan Zhao  Daohua Jiang  Xuemei Li  Xianping Wang  Yan Wu  Zeliang Chen  Xuejun C. Zhang
Affiliation:1. National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China;2. University of Chinese Academy of Sciences, Beijing 100049, China;3. Food Science and Engineering College, Beijing University of Agriculture, Beijing 102206, China;4. Department of Infectious Disease Control, Institute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China
Abstract:The prokaryotic 5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTAN) catalyzes the irreversible cleavage of the glycosidic bond in 5′-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH), a process that plays a key role in several metabolic pathways. Its absence in all mammalian species has implicated this enzyme as a promising target for antimicrobial drug design. Here, we report the crystal structure of BmMTAN in complex with its product adenine at a resolution of 2.6 Å determined by single-wavelength anomalous dispersion method. 11 key residues were mutated for kinetic characterization. Mutations of Tyr134 and Met144 resulted in the largest overall increase in Km, whereas mutagenesis of residues Glu18, Glu145 and Asp168 completely abolished activity. Glu145 and Asp168 were identified as active site residues essential for catalysis. The catalytic mechanism and implications of this structure for broad-based antibiotic design are discussed.
Keywords:BmMTAN, Brucella melitensis MTAN   INT, 2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyltetrazolium chloride   MTA, 5&prime  -methylthioadenosine   MTAN, MTA/SAH nucleosidase   NP-1, nucleoside phosphorylase-1   PDB, Protein Data Bank   PEG, polyethylene glycol   r.m.s.d., root mean square deviation   SAD, single-wavelength anomalous diffraction   SAH, S-adenosylhomocysteine   SeMet, seleno-methionine   WT, wild-type
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