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Crystal structure and biochemical studies of Brucella melitensis 5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Authors:Xusheng Kang  Yan Zhao  Daohua Jiang  Xuemei Li  Xianping Wang  Yan Wu  Zeliang Chen  Xuejun C Zhang
Institution:1. National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China;2. University of Chinese Academy of Sciences, Beijing 100049, China;3. Food Science and Engineering College, Beijing University of Agriculture, Beijing 102206, China;4. Department of Infectious Disease Control, Institute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China
Abstract:The prokaryotic 5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTAN) catalyzes the irreversible cleavage of the glycosidic bond in 5′-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH), a process that plays a key role in several metabolic pathways. Its absence in all mammalian species has implicated this enzyme as a promising target for antimicrobial drug design. Here, we report the crystal structure of BmMTAN in complex with its product adenine at a resolution of 2.6 Å determined by single-wavelength anomalous dispersion method. 11 key residues were mutated for kinetic characterization. Mutations of Tyr134 and Met144 resulted in the largest overall increase in Km, whereas mutagenesis of residues Glu18, Glu145 and Asp168 completely abolished activity. Glu145 and Asp168 were identified as active site residues essential for catalysis. The catalytic mechanism and implications of this structure for broad-based antibiotic design are discussed.
Keywords:BmMTAN  Brucella melitensis MTAN  INT  2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyltetrazolium chloride  MTA  5&prime  -methylthioadenosine  MTAN  MTA/SAH nucleosidase  NP-1  nucleoside phosphorylase-1  PDB  Protein Data Bank  PEG  polyethylene glycol  r  m  s  d    root mean square deviation  SAD  single-wavelength anomalous diffraction  SAH  S-adenosylhomocysteine  SeMet  seleno-methionine  WT  wild-type
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