Validation and characterization of a major QTL affecting leaf ABA concentration in maize

A previous study conducted on a maize (Zea mays L.) mapping population derived from Os420 × IABO78 identified a quantitative trait locus (QTL) for leaf-abscisic acid concentration (L-ABA) on chromosome 2 (bin 2.04). In order to validate this QTL, we analyzed with RFLP markers 16 F₄ lines obtained by divergent selection for L-ABA from the same source. Three RFLPs mapping near bin 2.04 showed skewed allelic frequencies; the L-ABA increasing allele (+) was more frequent within the eight lines selected for high L-ABA, while the decreasing allele (–) was more frequent within the eight lines selected for low L-ABA. To characterize more accurately the direct and associated effects of this QTL, near-isogenic lines were developed by molecular marker-assisted back-crossing; four backcross-derived lines were homozygous (+/+) at the QTL and four were (–/–). A pair of near-isogenic hybrids (+/+) and (–/–) at the QTL were also produced. These materials were field tested under water-stressed and well-watered conditions. Across water regimes, the four (+/+) lines averaged a significantly higher mean value than the four (–/–) lines for L-ABA (494 vs. 396 ng ABA g^–1 DW) and a significantly lower mean value for relative water content (90.6 vs. 92.0%). The (+/+) hybrid exceeded the (–/–) for L-ABA (476 vs. 325 ng g^–1 DW) and was less affected by root lodging (44.6 vs. 66.1%). Our results validate the presence of a major QTL for L-ABA on bin 2.04 and indicate that the QTL also affects root traits and relative water content.