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Truncation of N- and C-terminal regions of <Emphasis Type="Italic">Streptococcus mutans</Emphasis> dextranase enhances catalytic activity
Authors:Young-Min Kim  Ryoko Shimizu  Hiroyuki Nakai  Haruhide Mori  Masayuki Okuyama  Min-Sun Kang  Zui Fujimoto  Kazumi Funane  Doman Kim  Atsuo Kimura
Institution:(1) Research Faculty of Agriculture, Hokkaido University, Kita-9 Nishi-9, Kita-ku, Sapporo 060–8589, Japan;(2) Eco-Friendly Biomaterial Research Center and AI control Material Research Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, 580-185, Republic of Korea;(3) Faculty of Agriculture, Niigata University, Niigata 950-2181, Japan;(4) National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan;(5) National Food Research Institute, National Agriculture and Food Research Organization, Tsukuba 305-8642, Japan;(6) School of Biological Sciences and Technology, Chonnam National University, Gwangju, 500-757, Republic of Korea
Abstract:Multiple forms of native and recombinant endo-dextranases (Dexs) of the glycoside hydrolase family (GH) 66 exist. The GH 66 Dex gene from Streptococcus mutans ATCC 25175 (SmDex) was expressed in Escherichia coli. The recombinant full-size (95.4 kDa) SmDex protein was digested to form an 89.8 kDa isoform (SmDex90). The purified SmDex90 was proteolytically degraded to more than seven polypeptides (23–70 kDa) during long storage. The protease-insensitive protein was desirable for the biochemical analysis and utilization of SmDex. GH 66 Dex was predicted to comprise four regions from the N- to C-termini: N-terminal variable region (N-VR), conserved region (CR), glucan-binding site (GBS), and C-terminal variable region (C-VR). Five truncated SmDexs were generated by deleting N-VR, GBS, and/or C-VR. Two truncation-mutant enzymes devoid of C-VR (TM-NCGΔ) or N-VR/C-VR (TM-ΔCGΔ) were catalytically active, thereby indicating that N-VR and C-VR were not essential for the catalytic activity. TM-ΔCGΔ did not accept any further protease-degradation during long storage. TM-NCGΔ and TM-ΔCGΔ enhanced substrate hydrolysis, suggesting that N-VR and C-VR induce hindered substrate binding to the active site.
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