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Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
Authors:Coralie Dessauges,Jan Mikelson,Maciej Dobrzyń  ski,Marc‐  Antoine Jacques,Agne Frismantiene,Paolo Armando Gagliardi,Mustafa Khammash,Olivier Pertz
Affiliation:1. Institute of Cell Biology, University of Bern, Bern Switzerland ; 2. Department of Biosystems Science and Engineering, ETH Zurich, Basel Switzerland
Abstract:Combining single‐cell measurements of ERK activity dynamics with perturbations provides insights into the MAPK network topology. We built circuits consisting of an optogenetic actuator to activate MAPK signaling and an ERK biosensor to measure single‐cell ERK dynamics. This allowed us to conduct RNAi screens to investigate the role of 50 MAPK proteins in ERK dynamics. We found that the MAPK network is robust against most node perturbations. We observed that the ERK‐RAF and the ERK‐RSK2‐SOS negative feedback operate simultaneously to regulate ERK dynamics. Bypassing the RSK2‐mediated feedback, either by direct optogenetic activation of RAS, or by RSK2 perturbation, sensitized ERK dynamics to further perturbations. Similarly, targeting this feedback in a human ErbB2‐dependent oncogenic signaling model increased the efficiency of a MEK inhibitor. The RSK2‐mediated feedback is thus important for the ability of the MAPK network to produce consistent ERK outputs, and its perturbation can enhance the efficiency of MAPK inhibitors.
Keywords:ERK dynamics, MAPK network, optogenetics, signaling robustness, single‐  cell biology
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