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XdomView: protein domain and exon position visualization
Authors:Vivek Gopalan  Tan Tin Wee  Ranganathan Shoba
Institution:Department of Biochemistry, National University of Singapore, Singapore 119260.
Abstract:SUMMARY: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification. AVAILABILITY: Freely available from http://surya.bic.nus.edu.sg/xdom.
Keywords:
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