Larmor frequency selective model free analysis of protein NMR relaxation |
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Authors: | David M. LeMaster |
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Affiliation: | (1) Department of Biochemistry, University of Wisconsin-Madison, 420 Henry Mall, 53706-1569 Madison, WI, U.S.A. |
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Abstract: | Summary The Lipari-Szabo dynamical formalism is extended by setting the time constants of the Lorentzian terms to and . This analysis is compared to the earlier proposed three-parameter extended model free formalism with regard to the range of equivalence and the advantages of the simplified two-parameter (Sinffsup2,SinfHsup2) and (Sinffsup2,SinfNsup2) representations. Spectral density components are calculated and compared to those obtained from the spectral density analysis formalism. Protein relaxation data, commonly analyzed in terms of the two-parameter representation, may correspond to a dynamically heterogeneous behaviour that is more appropriately represented in terms of a fast limit order parameter and a second, lower frequency order parameter. |
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Keywords: | Protein dynamics NMR relaxation Spectral density analysis |
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