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The N-terminal region of the starch-branching enzyme from Phaseolus vulgaris L. is essential for optimal catalysis and structural stability
Authors:Hamada Shigeki  Ito Hiroyuki  Ueno Hiroshi  Takeda Yasuhito  Matsui Hirokazu
Institution:Division of Applied Bioscience, Graduate School of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.
Abstract:Starch-branching enzymes (SBEs) play a pivotal role in determining the fine structure of starch by catalyzing the syntheses of alpha-1,6-branch points. They are the members of the alpha-amylase family and have four conserved regions in a central (beta/alpha)8 barrel, including the catalytic sites. Although the role of the catalytic barrel domain of an SBE is known, that of its N- and C-terminal regions remain unclear. We have previously shown that the C-terminal regions of the two SBE isozymes (designated as PvSBE1 and PvSBE2) from kidney bean (Phaseolus vulgaris L.) have different roles in branching enzyme activity. To understand the contribution of the N-terminal region to catalysis, six chimeric enzymes were constructed between PvSBE1 and PvSBE2. Only one enzyme (1Na/2Nb)-II, in which a portion of the N-terminal region of PvSBE2 was substituted by the corresponding region of PvSBE1, retained 6% of the PvSBE2 activity. The N-terminal truncated form (DeltaN46-PvSBE2), lacking 46 N-terminal residues of PvSBE2, lost enzyme activity and stability to proteolysis. To investigate the possible function of this region, three residues (Asp-15, His-24, and Arg-28) among these 46 residues were subjected to site-directed mutagenesis. The purified mutant enzymes showed nearly the same K(m) values as PvSBE2 but had lower V(max) values and heat stabilities than PvSBE2. These results suggest that the N-terminal region of the kidney bean SBE is essential for maximum enzyme activity and thermostability.
Keywords:SBE  starch-branching enzyme  GBE  glycogen-branching enzyme  DP  degree of polymerization  HPAEC-PAD  high-performance anion exchange chromatography-pulsed amperometric detector  PvSBE  kidney bean (Phaseolus vulgaris L  ) SBE  (1Na/2Nb)-II  N-terminal chimeric enzyme between PvSBE1 and PvSBE2  ΔN46-PvSBE2  N-terminal truncated form of PvSBE2  D15A-  D15E-  H24A-  R28A-  and R28K-PvSBE2  site-directed mutant forms of PvSBE2
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